SubtiBank SubtiBank
yndB [2019-07-02 10:04:51]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yndB [2019-07-02 10:04:51]

may be involved in the stress response of B. subtilis to chalcone-like flavonoids released by plants due to a pathogen infection
locus
BSU17730
pI
4.60
mw
15.98 kDa
protein length
144 aa Sequence Blast
gene length
435 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,906,272 1,906,706

    The protein

    Protein family

  • AHA1 family (according to Swiss-Prot)

    • Structure

  • [PDB|2KTE] [Pubmed|20818668]

    • Expression and Regulation

    Operons

    genes
    [gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B106 (yndB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1105 NBRP B. subtilis, Japan]
  • BKE17730 ([gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGTTTACCTCTTGAC, downstream forward: _UP4_TAAAAAAGAGAGAGGTATCT
  • BKK17730 ([gene|9A9F44B4624A2D151B532F092294605F61BEB858|yndB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17730 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCGTTTACCTCTTGAC, downstream forward: _UP4_TAAAAAAGAGAGAGGTATCT

    • References

  • 19888688,20818668,28160315,30368907